MHMM v3.0 type: linear num_states: 63 num_spacers: 4 spacer_length: 1 alph_size: 20 alphabet: ACDEFGHIKLMNPQRSTVWY background: 0.0720000 0.0290000 0.0680000 0.0770000 0.0430000 0.0570000 0.0260000 0.0480000 0.0860000 0.0870000 0.0180000 0.0530000 0.0330000 0.0290000 0.0310000 0.0590000 0.0480000 0.0690000 0.0170000 0.0500000 motif_file: input/lipo.meme.html State: 0 type: start i_motif: -1 motif_id: --- i_position: -1 id_char: . num_sites: 0 State: 1 type: spacer i_motif: -1 motif_id: --- i_position: 0 id_char: . num_sites: 10 emit: 0.0720000 0.0290000 0.0680000 0.0770000 0.0430000 0.0570000 0.0260000 0.0480000 0.0860000 0.0870000 0.0180000 0.0530000 0.0330000 0.0290000 0.0310000 0.0590000 0.0480000 0.0690000 0.0170000 0.0500000 State: 2 type: start_motif i_motif: 0 motif_id: 1 i_position: 0 id_char: * num_sites: 5 emit: 0.0376480 0.0055010 0.0087650 0.0130210 0.0078190 0.0121830 0.0053370 0.0217600 0.0142700 0.0232080 0.0088620 0.0108430 0.3976950 0.0110400 0.0109970 0.0353800 0.2555070 0.1131510 0.0017650 0.0052490 State: 3 type: mid_motif i_motif: 0 motif_id: 1 i_position: 1 id_char: _ num_sites: 5 emit: 0.0461480 0.0080250 0.0136450 0.0248750 0.0164580 0.0964060 0.0103010 0.0556140 0.1109530 0.0506770 0.0977710 0.0167670 0.0098580 0.0206100 0.0238010 0.0293180 0.0330500 0.3203020 0.0036170 0.0118040 State: 4 type: mid_motif i_motif: 0 motif_id: 1 i_position: 2 id_char: _ num_sites: 5 emit: 0.0437680 0.0034080 0.1396370 0.1575180 0.0074370 0.0214020 0.0172050 0.0115490 0.1502820 0.0205960 0.0096130 0.1254510 0.0135910 0.0419920 0.1263440 0.0462740 0.0337560 0.0179180 0.0024070 0.0098530 State: 5 type: mid_motif i_motif: 0 motif_id: 1 i_position: 3 id_char: _ num_sites: 5 emit: 0.0133400 0.0021760 0.1288950 0.0197920 0.0030650 0.1080330 0.0132080 0.0041620 0.0158300 0.0051200 0.0021300 0.5968970 0.0060750 0.0125440 0.0088990 0.0336450 0.0160380 0.0046770 0.0011090 0.0043640 State: 6 type: mid_motif i_motif: 0 motif_id: 1 i_position: 4 id_char: _ num_sites: 5 emit: 0.0078970 0.0039170 0.0026800 0.0032610 0.8252200 0.0030490 0.0021050 0.0144960 0.0029830 0.0623660 0.0082940 0.0026950 0.0032690 0.0021970 0.0025540 0.0075060 0.0041680 0.0126670 0.0042840 0.0243930 State: 7 type: mid_motif i_motif: 0 motif_id: 1 i_position: 5 id_char: _ num_sites: 5 emit: 0.0088720 0.0016180 0.8438390 0.0342260 0.0025600 0.0066770 0.0047820 0.0037360 0.0052490 0.0048660 0.0019630 0.0459500 0.0025060 0.0048240 0.0043970 0.0096590 0.0054270 0.0049570 0.0009810 0.0029120 State: 8 type: mid_motif i_motif: 0 motif_id: 1 i_position: 6 id_char: _ num_sites: 5 emit: 0.0341580 0.0083980 0.0060290 0.0105390 0.0207830 0.0102370 0.0065170 0.2717390 0.0824080 0.1677830 0.0254140 0.0094640 0.0070080 0.0102000 0.0112700 0.0203240 0.0279430 0.1786740 0.0778650 0.0132460 State: 9 type: mid_motif i_motif: 0 motif_id: 1 i_position: 7 id_char: _ num_sites: 5 emit: 0.1391540 0.0037050 0.0396370 0.1692150 0.0072670 0.0200450 0.0154570 0.0117450 0.0545610 0.0203110 0.0094760 0.0321130 0.0136690 0.1306450 0.0330950 0.2336390 0.0362180 0.0185700 0.0022760 0.0092010 State: 10 type: mid_motif i_motif: 0 motif_id: 1 i_position: 8 id_char: _ num_sites: 5 emit: 0.1117030 0.0027860 0.0187020 0.0347970 0.0049210 0.0137340 0.0131340 0.0091410 0.3995760 0.0161680 0.0073060 0.1065640 0.0090400 0.0331030 0.1453510 0.0288730 0.0229070 0.0131040 0.0020230 0.0070670 State: 11 type: mid_motif i_motif: 0 motif_id: 1 i_position: 9 id_char: _ num_sites: 5 emit: 0.0204750 0.0061030 0.0049540 0.0072960 0.4650580 0.0066990 0.0111530 0.0941500 0.0075270 0.0469670 0.0140440 0.0064310 0.0054390 0.0060650 0.0072050 0.0146730 0.0140790 0.0932890 0.0063050 0.1620880 State: 12 type: mid_motif i_motif: 0 motif_id: 1 i_position: 10 id_char: _ num_sites: 5 emit: 0.4742420 0.0065970 0.0282360 0.0291630 0.0065870 0.0245240 0.1009140 0.0101440 0.0294540 0.0156590 0.0069150 0.1204340 0.0084520 0.0198930 0.0192390 0.0451150 0.0244530 0.0207640 0.0018750 0.0073400 State: 13 type: mid_motif i_motif: 0 motif_id: 1 i_position: 11 id_char: 1 num_sites: 5 emit: 0.0180800 0.0019310 0.0085230 0.0061030 0.0019780 0.8989460 0.0026790 0.0026300 0.0064450 0.0032770 0.0018080 0.0092770 0.0034090 0.0033970 0.0060010 0.0127590 0.0052070 0.0042840 0.0010980 0.0021670 State: 14 type: mid_motif i_motif: 0 motif_id: 1 i_position: 12 id_char: _ num_sites: 5 emit: 0.1321270 0.0037920 0.0364460 0.1585230 0.0078980 0.0198370 0.0163070 0.0133170 0.1462700 0.0222320 0.0104090 0.0326820 0.0138960 0.0418360 0.0385340 0.0488880 0.2242200 0.0204220 0.0024920 0.0098720 State: 15 type: mid_motif i_motif: 0 motif_id: 1 i_position: 13 id_char: _ num_sites: 5 emit: 0.0048430 0.0019920 0.0032780 0.0036090 0.0170840 0.0039970 0.0022550 0.0037710 0.0039110 0.0158050 0.0034990 0.0033870 0.0023400 0.0035930 0.0046630 0.0043560 0.0038900 0.0057490 0.8961360 0.0118430 State: 16 type: mid_motif i_motif: 0 motif_id: 1 i_position: 14 id_char: _ num_sites: 5 emit: 0.0095950 0.0032350 0.0048050 0.0056790 0.0721660 0.0047200 0.3026020 0.0083470 0.0059110 0.0176490 0.0055690 0.0087990 0.0038680 0.0086530 0.0078050 0.0102150 0.0069980 0.0097720 0.1252540 0.3783580 State: 17 type: mid_motif i_motif: 0 motif_id: 1 i_position: 15 id_char: _ num_sites: 5 emit: 0.1492800 0.0044670 0.0347390 0.2549750 0.0071680 0.0203660 0.0136080 0.0121300 0.0468910 0.0196440 0.0091450 0.0294720 0.0128580 0.0350340 0.0287050 0.1512520 0.1401260 0.0194460 0.0021750 0.0085190 State: 18 type: mid_motif i_motif: 0 motif_id: 1 i_position: 16 id_char: _ num_sites: 5 emit: 0.0131230 0.0035190 0.0034610 0.0044710 0.0110970 0.0040130 0.0021390 0.5636370 0.0054890 0.1244170 0.0611370 0.0044010 0.0029470 0.0039620 0.0043130 0.0079840 0.0121840 0.1605980 0.0016910 0.0054160 State: 19 type: mid_motif i_motif: 0 motif_id: 1 i_position: 17 id_char: _ num_sites: 5 emit: 0.6969580 0.0110570 0.0050510 0.0078640 0.0071290 0.0217800 0.0030240 0.0788660 0.0074710 0.0216650 0.0083370 0.0058500 0.0038450 0.0054730 0.0067500 0.0428690 0.0183470 0.0419290 0.0017400 0.0039940 State: 20 type: end_motif i_motif: 0 motif_id: 1 i_position: 18 id_char: * num_sites: 5 emit: 0.0189900 0.0033570 0.0076680 0.0159210 0.0085580 0.0078160 0.0072520 0.0197640 0.5789910 0.1119580 0.0835020 0.0112870 0.0055270 0.0171790 0.0430000 0.0151330 0.0153960 0.0205400 0.0020700 0.0060900 State: 21 type: spacer i_motif: -1 motif_id: --- i_position: 0 id_char: . num_sites: 10 emit: 0.0720000 0.0290000 0.0680000 0.0770000 0.0430000 0.0570000 0.0260000 0.0480000 0.0860000 0.0870000 0.0180000 0.0530000 0.0330000 0.0290000 0.0310000 0.0590000 0.0480000 0.0690000 0.0170000 0.0500000 State: 22 type: start_motif i_motif: 1 motif_id: 2 i_position: 0 id_char: * num_sites: 5 emit: 0.0320080 0.0030910 0.0438800 0.2703690 0.1115680 0.0212310 0.0146870 0.0103390 0.0399040 0.0166380 0.0071790 0.2700430 0.0105520 0.0292560 0.0239730 0.0392840 0.0262110 0.0148670 0.0023310 0.0125890 State: 23 type: mid_motif i_motif: 1 motif_id: 2 i_position: 1 id_char: _ num_sites: 5 emit: 0.0114500 0.0024010 0.0665340 0.0143180 0.0039090 0.0115520 0.0140420 0.0069730 0.0138080 0.0452720 0.0033120 0.7265280 0.0052340 0.0113680 0.0088200 0.0273390 0.0143030 0.0069600 0.0015540 0.0043240 State: 24 type: mid_motif i_motif: 1 motif_id: 2 i_position: 2 id_char: _ num_sites: 5 emit: 0.0452510 0.0051360 0.0997690 0.0498880 0.0095380 0.0172400 0.0137040 0.0304600 0.1187660 0.0281120 0.0117270 0.0273910 0.0121350 0.0318920 0.0308230 0.0391520 0.1154930 0.3015910 0.0025410 0.0093920 State: 25 type: mid_motif i_motif: 1 motif_id: 2 i_position: 3 id_char: _ num_sites: 5 emit: 0.0299340 0.0069110 0.0091330 0.0146700 0.3328290 0.0103010 0.0900480 0.0325190 0.0157650 0.0455390 0.0157110 0.0116560 0.0922760 0.0124580 0.0130880 0.0223100 0.0214740 0.1094550 0.0065880 0.1073340 State: 26 type: mid_motif i_motif: 1 motif_id: 2 i_position: 4 id_char: _ num_sites: 5 emit: 0.0230300 0.0049460 0.0094220 0.0145600 0.0193180 0.0096180 0.0071250 0.0231620 0.0170270 0.0853760 0.0120450 0.0616300 0.0062080 0.0124900 0.0133070 0.0202570 0.0774200 0.0286440 0.5392620 0.0151510 State: 27 type: mid_motif i_motif: 1 motif_id: 2 i_position: 5 id_char: _ num_sites: 5 emit: 0.0195240 0.0048530 0.0028170 0.0038370 0.0074810 0.0033330 0.0017070 0.3651090 0.0039260 0.0432640 0.0111900 0.0031190 0.0028820 0.0026670 0.0034840 0.0058290 0.0137730 0.4972230 0.0009230 0.0030580 State: 28 type: mid_motif i_motif: 1 motif_id: 2 i_position: 6 id_char: _ num_sites: 5 emit: 0.0134170 0.0039650 0.0027690 0.0053690 0.0181590 0.0041390 0.0031870 0.1057610 0.0059970 0.6643520 0.0270150 0.0039380 0.0640370 0.0064230 0.0065580 0.0079700 0.0113570 0.0370920 0.0023890 0.0061060 State: 29 type: mid_motif i_motif: 1 motif_id: 2 i_position: 7 id_char: _ num_sites: 5 emit: 0.1309220 0.0034070 0.2705640 0.0640210 0.0068140 0.0218650 0.0155900 0.0104350 0.1376740 0.0181020 0.0083630 0.0408990 0.0127280 0.0357970 0.0310680 0.1329910 0.0314160 0.0162670 0.0021440 0.0089340 State: 30 type: mid_motif i_motif: 1 motif_id: 2 i_position: 8 id_char: _ num_sites: 5 emit: 0.0170770 0.0040750 0.0050570 0.0046230 0.0035350 0.0063140 0.0028020 0.0093910 0.0070430 0.0076200 0.0049860 0.0114810 0.0040520 0.0057810 0.0061200 0.0506750 0.8321130 0.0136020 0.0011270 0.0025250 State: 31 type: mid_motif i_motif: 1 motif_id: 2 i_position: 9 id_char: _ num_sites: 5 emit: 0.0081390 0.0015350 0.8731880 0.0320340 0.0024300 0.0057740 0.0042480 0.0035370 0.0045190 0.0046220 0.0018440 0.0263340 0.0023120 0.0042570 0.0039830 0.0081740 0.0047320 0.0046870 0.0009470 0.0027030 State: 32 type: mid_motif i_motif: 1 motif_id: 2 i_position: 10 id_char: _ num_sites: 5 emit: 0.0149900 0.0038040 0.0102090 0.0097300 0.0747570 0.0080930 0.0200110 0.0099660 0.0102050 0.0188690 0.0061960 0.1222020 0.0051120 0.0077130 0.0090880 0.0155620 0.0097390 0.0119340 0.0096790 0.6221420 State: 33 type: mid_motif i_motif: 1 motif_id: 2 i_position: 11 id_char: 2 num_sites: 5 emit: 0.0271800 0.0015670 0.1454090 0.2203640 0.0031450 0.0131920 0.0090390 0.0063060 0.4117290 0.0109290 0.0049420 0.0226490 0.0088580 0.0314790 0.0247500 0.0245430 0.0179550 0.0102910 0.0011200 0.0045540 State: 34 type: mid_motif i_motif: 1 motif_id: 2 i_position: 12 id_char: _ num_sites: 5 emit: 0.0156790 0.0025490 0.0247180 0.0186220 0.0041140 0.0134340 0.0141860 0.0072430 0.0809170 0.0090620 0.0041020 0.6442200 0.0062730 0.0163010 0.0178630 0.0304050 0.0754950 0.0082210 0.0016270 0.0049690 State: 35 type: mid_motif i_motif: 1 motif_id: 2 i_position: 13 id_char: _ num_sites: 5 emit: 0.0124900 0.0037820 0.0049990 0.0065330 0.3112200 0.0052920 0.0205810 0.0102410 0.0067860 0.0207350 0.0064740 0.0069370 0.0044290 0.0061070 0.0073120 0.0116670 0.0076860 0.0117740 0.0118020 0.5231530 State: 36 type: mid_motif i_motif: 1 motif_id: 2 i_position: 14 id_char: _ num_sites: 5 emit: 0.2616870 0.0067580 0.0036500 0.0066460 0.0188550 0.0076700 0.0040610 0.1734820 0.0075290 0.3492030 0.0233900 0.0057830 0.0048980 0.0067300 0.0070850 0.0146870 0.0193050 0.0673700 0.0028910 0.0083200 State: 37 type: mid_motif i_motif: 1 motif_id: 2 i_position: 15 id_char: _ num_sites: 5 emit: 0.0131230 0.0035190 0.0034610 0.0044710 0.0110970 0.0040130 0.0021390 0.5636370 0.0054890 0.1244170 0.0611370 0.0044010 0.0029470 0.0039620 0.0043130 0.0079840 0.0121840 0.1605980 0.0016910 0.0054160 State: 38 type: mid_motif i_motif: 1 motif_id: 2 i_position: 16 id_char: _ num_sites: 5 emit: 0.1438970 0.0047960 0.0337390 0.0533100 0.0915580 0.1203060 0.0188000 0.0166820 0.0556720 0.0262930 0.0118070 0.1213400 0.0141860 0.1232200 0.0352010 0.0492090 0.0362930 0.0245740 0.0029680 0.0161490 State: 39 type: mid_motif i_motif: 1 motif_id: 2 i_position: 17 id_char: _ num_sites: 5 emit: 0.0238110 0.0638400 0.0090900 0.0122950 0.1134370 0.0086930 0.0940370 0.0154230 0.0120670 0.0276270 0.0096380 0.0103740 0.0073360 0.0091970 0.0118430 0.0204530 0.0130200 0.0186620 0.0112290 0.5079300 State: 40 type: mid_motif i_motif: 1 motif_id: 2 i_position: 18 id_char: _ num_sites: 5 emit: 0.0438810 0.0080370 0.0166790 0.0286770 0.0359090 0.0156370 0.0183730 0.0426320 0.0311850 0.1434140 0.0990650 0.1037430 0.0109020 0.0230690 0.0225780 0.1177310 0.0358680 0.0505640 0.0053570 0.1466990 State: 41 type: end_motif i_motif: 1 motif_id: 2 i_position: 19 id_char: * num_sites: 5 emit: 0.0091780 0.8853600 0.0023500 0.0190740 0.0032280 0.0028540 0.0016580 0.0247770 0.0034000 0.0090050 0.0035890 0.0027600 0.0019260 0.0026230 0.0033080 0.0052790 0.0066050 0.0104280 0.0006450 0.0019530 State: 42 type: spacer i_motif: -1 motif_id: --- i_position: 0 id_char: . num_sites: 10 emit: 0.0720000 0.0290000 0.0680000 0.0770000 0.0430000 0.0570000 0.0260000 0.0480000 0.0860000 0.0870000 0.0180000 0.0530000 0.0330000 0.0290000 0.0310000 0.0590000 0.0480000 0.0690000 0.0170000 0.0500000 State: 43 type: start_motif i_motif: 2 motif_id: 3 i_position: 0 id_char: * num_sites: 5 emit: 0.0060810 0.0024850 0.0032270 0.0035210 0.5249350 0.0037230 0.2944510 0.0079800 0.0044520 0.0180700 0.0048840 0.0059290 0.0027200 0.0052050 0.0051130 0.0067440 0.0050630 0.0083920 0.0098070 0.0772170 State: 44 type: mid_motif i_motif: 2 motif_id: 3 i_position: 1 id_char: _ num_sites: 5 emit: 0.0443640 0.0040990 0.1225910 0.0650470 0.0095080 0.0206930 0.0167940 0.0169580 0.0547260 0.2196100 0.0119610 0.0353730 0.0138500 0.1285240 0.0341400 0.1303140 0.0348090 0.0232360 0.0026560 0.0107470 State: 45 type: mid_motif i_motif: 2 motif_id: 3 i_position: 2 id_char: _ num_sites: 5 emit: 0.0435250 0.0030070 0.1350760 0.1905100 0.0068810 0.0185950 0.0153920 0.0987400 0.1444970 0.0200330 0.0093510 0.0301710 0.0133950 0.1346470 0.0340170 0.0415470 0.0314650 0.0179790 0.0021950 0.0089780 State: 46 type: mid_motif i_motif: 2 motif_id: 3 i_position: 3 id_char: _ num_sites: 5 emit: 0.1166130 0.0043030 0.1069730 0.0554620 0.0862790 0.0202740 0.1474130 0.0144010 0.0553150 0.0249570 0.0113600 0.0359360 0.0141120 0.1294520 0.0365160 0.0462940 0.0345580 0.0214100 0.0034260 0.0349460 State: 47 type: mid_motif i_motif: 2 motif_id: 3 i_position: 4 id_char: _ num_sites: 5 emit: 0.1142670 0.0085620 0.0063730 0.0109720 0.0187160 0.0103930 0.0063850 0.2450690 0.0124180 0.1457300 0.0230720 0.0801320 0.0070670 0.0100460 0.0109780 0.0206190 0.0283620 0.2256860 0.0036600 0.0114940 State: 48 type: mid_motif i_motif: 2 motif_id: 3 i_position: 5 id_char: _ num_sites: 5 emit: 0.0269780 0.0046470 0.0125620 0.0229160 0.0194250 0.0114610 0.0873030 0.0939980 0.1147680 0.0320110 0.0118270 0.0160120 0.0077250 0.0219010 0.0304870 0.0232520 0.0219090 0.0272290 0.3903730 0.0232160 State: 49 type: mid_motif i_motif: 2 motif_id: 3 i_position: 6 id_char: _ num_sites: 5 emit: 0.0769740 0.0066310 0.0046720 0.0066730 0.0076000 0.0053490 0.0034550 0.1205570 0.0061430 0.0297910 0.0090630 0.0044820 0.0052180 0.0043370 0.0066600 0.0091940 0.0208260 0.6680490 0.0012480 0.0030770 State: 50 type: mid_motif i_motif: 2 motif_id: 3 i_position: 7 id_char: _ num_sites: 5 emit: 0.0772730 0.0038330 0.0027980 0.0053580 0.0166070 0.0049300 0.0029540 0.0371700 0.0058870 0.7386880 0.0250540 0.0038280 0.0043380 0.0062030 0.0064000 0.0090990 0.0106560 0.0312970 0.0021600 0.0054660 State: 51 type: mid_motif i_motif: 2 motif_id: 3 i_position: 8 id_char: _ num_sites: 5 emit: 0.0366470 0.0028350 0.0433690 0.2979870 0.0048570 0.0175070 0.0109370 0.0082680 0.0379610 0.0140880 0.0063060 0.0282780 0.1438730 0.0314300 0.0215900 0.2463990 0.0265330 0.0134950 0.0014850 0.0061570 State: 52 type: mid_motif i_motif: 2 motif_id: 3 i_position: 9 id_char: _ num_sites: 5 emit: 0.0285760 0.0035950 0.0151460 0.0299790 0.0899760 0.0125320 0.0123500 0.0150810 0.3969780 0.0231780 0.0905740 0.0196700 0.0086130 0.0297770 0.1413430 0.0265470 0.0230980 0.0195340 0.0024750 0.0109780 State: 53 type: mid_motif i_motif: 2 motif_id: 3 i_position: 10 id_char: 3 num_sites: 5 emit: 0.0277260 0.0053130 0.0137400 0.0110150 0.0053030 0.0128100 0.0746200 0.0056640 0.0141390 0.0084660 0.0040080 0.0224710 0.0066160 0.0086630 0.0109190 0.6703440 0.0835690 0.0073260 0.0014840 0.0058030 State: 54 type: mid_motif i_motif: 2 motif_id: 3 i_position: 11 id_char: _ num_sites: 5 emit: 0.0306950 0.0075300 0.0061170 0.0111310 0.0175780 0.0091220 0.0059930 0.2203760 0.2114530 0.1732410 0.0217470 0.0090900 0.0063330 0.0105070 0.0127600 0.0181240 0.0250500 0.1896820 0.0032500 0.0102200 State: 55 type: mid_motif i_motif: 2 motif_id: 3 i_position: 12 id_char: _ num_sites: 5 emit: 0.0405890 0.0061720 0.0560630 0.0226800 0.0078660 0.0094640 0.0069320 0.0522840 0.0220580 0.0261670 0.0091460 0.0121410 0.0076080 0.0134200 0.0595350 0.0178860 0.0247910 0.5985430 0.0016840 0.0049720 State: 56 type: mid_motif i_motif: 2 motif_id: 3 i_position: 13 id_char: _ num_sites: 5 emit: 0.0120220 0.0032480 0.0053960 0.0607940 0.0158950 0.0042510 0.0034050 0.0339520 0.0084000 0.7491740 0.0250070 0.0047100 0.0045720 0.0080730 0.0079120 0.0080440 0.0099370 0.0275860 0.0021160 0.0055050 State: 57 type: mid_motif i_motif: 2 motif_id: 3 i_position: 14 id_char: _ num_sites: 5 emit: 0.0467810 0.0039070 0.0380430 0.1425360 0.0082530 0.0226770 0.0180860 0.0126470 0.1436440 0.0220670 0.0104070 0.1243300 0.0144210 0.0423450 0.0384800 0.1484740 0.1302600 0.0193780 0.0026050 0.0106610 State: 58 type: mid_motif i_motif: 2 motif_id: 3 i_position: 15 id_char: _ num_sites: 5 emit: 0.0194550 0.0027150 0.0070400 0.0055180 0.2292890 0.6414450 0.0040050 0.0057350 0.0058710 0.0090360 0.0031910 0.0084320 0.0036500 0.0039920 0.0053790 0.0138620 0.0074560 0.0078020 0.0024790 0.0136470 State: 59 type: mid_motif i_motif: 2 motif_id: 3 i_position: 16 id_char: _ num_sites: 5 emit: 0.0206100 0.0026160 0.0405820 0.1288570 0.0056590 0.0200530 0.3217060 0.0054920 0.0275900 0.0103170 0.0045180 0.2829320 0.0081060 0.0261920 0.0196850 0.0342170 0.0197930 0.0082150 0.0017810 0.0110780 State: 60 type: end_motif i_motif: 2 motif_id: 3 i_position: 17 id_char: * num_sites: 5 emit: 0.1376480 0.0071940 0.0129350 0.0215700 0.0113740 0.0155310 0.0083610 0.0269170 0.0236130 0.0322210 0.1001100 0.0172680 0.1421550 0.0176990 0.0170530 0.0525130 0.3081430 0.0363190 0.0027060 0.0086680 State: 61 type: spacer i_motif: -1 motif_id: --- i_position: 0 id_char: . num_sites: 10 emit: 0.0720000 0.0290000 0.0680000 0.0770000 0.0430000 0.0570000 0.0260000 0.0480000 0.0860000 0.0870000 0.0180000 0.0530000 0.0330000 0.0290000 0.0310000 0.0590000 0.0480000 0.0690000 0.0170000 0.0500000 State: 62 type: end i_motif: -1 motif_id: --- i_position: -1 id_char: . num_sites: 0 Transition probability matrix (63 x 63): 0 0.928571 0.0714286 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.928571 0.0714286 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 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